7L1C
Crystal structure of HLA-A*03:01 in complex with a mutant PIK3CA peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-02 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 155.720, 155.720, 85.660 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.950 - 1.960 |
R-factor | 0.1707 |
Rwork | 0.169 |
R-free | 0.20510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2xpg |
RMSD bond length | 0.015 |
RMSD bond angle | 1.189 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.990 |
High resolution limit [Å] | 1.960 | 1.960 |
Rmerge | 0.123 | 0.918 |
Rmeas | 0.127 | 0.960 |
Rpim | 0.029 | 0.267 |
Number of reflections | 44346 | 2187 |
<I/σ(I)> | 29.3 | |
Completeness [%] | 99.9 | 100 |
Redundancy | 17.6 | 10.9 |
CC(1/2) | 0.800 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 277.15 | 20% w/v Polyethylene glycol 3,350, 200 mM Ammonium formate, pH 6.6 |