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7KUA

Crystal structure of the MarR family transcriptional regulator from Pseudomonas putida bound to Indole 3 acetic acid

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2020-11-15
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.03322
Spacegroup nameP 31 2 1
Unit cell lengths57.557, 57.557, 91.384
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution25.990 - 1.890
R-factor0.1823
Rwork0.178
R-free0.21580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3cjn
RMSD bond length0.010
RMSD bond angle0.918
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.910
High resolution limit [Å]1.8801.880
Number of reflections14591715
<I/σ(I)>33.4
Completeness [%]99.9
Redundancy8.3
CC(1/2)1.0000.957
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Anatrace MCSG2 screen 35 % (v/v) Microlytic Mix(1), pH 7.0, which consists of: 1.8305 M Malonic acid, 0.25 M Ammonium citrate tribasic, 0.12 M Succinic acid, 0.3 M DL-Malic acid, 0.4 M Sodium acetate trihydrate, 0.5 M Sodium formate, 0.16 M Ammonium tartrate dibasic, the mixture titrated to pH 7.0 using sodium hydroxide

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PDB entries from 2024-05-15

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