7KQQ
Crystal structure of human WDR55
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-08-07 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.97911 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 78.976, 58.599, 88.231 |
Unit cell angles | 90.00, 95.48, 90.00 |
Refinement procedure
Resolution | 48.750 - 1.800 |
R-factor | 0.19 |
Rwork | 0.188 |
R-free | 0.23330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1tbg |
RMSD bond length | 0.011 |
RMSD bond angle | 1.644 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | BALBES |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.750 | 48.750 | 1.840 |
High resolution limit [Å] | 1.800 | 9.000 | 1.800 |
Rmerge | 0.071 | 0.038 | 0.567 |
Rmeas | 0.085 | 0.045 | 0.673 |
Rpim | 0.045 | 0.023 | 0.356 |
Total number of observations | 234127 | 1968 | 14888 |
Number of reflections | 72091 | 575 | 4411 |
<I/σ(I)> | 8.2 | 18.1 | 1.4 |
Completeness [%] | 96.9 | 90.5 | 99.5 |
Redundancy | 3.2 | 3.4 | 3.4 |
CC(1/2) | 0.995 | 0.996 | 0.705 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 20% W/V PEG 3350, 0.2 M Potassium Thiocyanate |