7KPI
Crystal structure of the SPOP MATH domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-08-30 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.999995 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 62.642, 53.246, 41.596 |
Unit cell angles | 90.00, 101.39, 90.00 |
Refinement procedure
Resolution | 40.780 - 1.700 |
R-factor | 0.1611 |
Rwork | 0.159 |
R-free | 0.19570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ivb |
RMSD bond length | 0.011 |
RMSD bond angle | 1.233 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.046 | 0.316 |
Rpim | 0.018 | 0.120 |
Number of reflections | 14537 | 693 |
<I/σ(I)> | 46 | 9 |
Completeness [%] | 98.3 | 95.2 |
Redundancy | 7.6 | 7.7 |
CC(1/2) | 0.982 | 0.982 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.1 M HEPES, pH 7.5, 23% (w/v) PME 550, 5 mM DTT |