7KPH
SARS-CoV-2 Main Protease in mature form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | LNLS SIRIUS BEAMLINE MANACA |
| Synchrotron site | LNLS SIRIUS |
| Beamline | MANACA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-11-05 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 1.368480 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 112.995, 52.847, 44.741 |
| Unit cell angles | 90.00, 102.86, 90.00 |
Refinement procedure
| Resolution | 55.080 - 1.460 |
| R-factor | 0.1677 |
| Rwork | 0.167 |
| R-free | 0.18090 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5r8t |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.18.2) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 55.080 | 55.080 | 1.540 |
| High resolution limit [Å] | 1.460 | 4.620 | 1.460 |
| Rmerge | 0.049 | 0.038 | 0.461 |
| Rmeas | 0.058 | 0.045 | 0.550 |
| Rpim | 0.031 | 0.024 | 0.298 |
| Total number of observations | 142926 | 5114 | 19535 |
| Number of reflections | 42249 | 1451 | 5935 |
| <I/σ(I)> | 12.8 | 30.3 | 2.4 |
| Completeness [%] | 94.9 | 98.8 | 91.2 |
| Redundancy | 3.4 | 3.5 | 3.3 |
| CC(1/2) | 0.998 | 0.997 | 0.833 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M Bis-Tris, 25% PEG 3350 cryo 30% PEG 400 |






