7KO6
C1B domain of Protein kinase C in complex with ingenol-3-angelate and phosphocholine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2020-09-22 |
Detector | Bruker PHOTON II |
Wavelength(s) | 1.54 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 34.384, 25.909, 57.731 |
Unit cell angles | 90.00, 98.39, 90.00 |
Refinement procedure
Resolution | 28.560 - 1.800 |
R-factor | 0.1779 |
Rwork | 0.176 |
R-free | 0.21540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ptq |
RMSD bond length | 0.011 |
RMSD bond angle | 2.187 |
Data reduction software | XDS |
Data scaling software | SAINT |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.000 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.114 | 0.480 |
Number of reflections | 4819 | 704 |
<I/σ(I)> | 15.76 | 3.79 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.54 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277.15 | Screen condition: 0.2 M Ammonium acetate, 0.1 M Sodium phosphate, 30% Isopropanol, pH 6.8, Drop condition: Protein: 2 mM in MES pH 6.5, 150 mM KCl, Phosphatidylcholine: 20 mM, Ingenol-3-angelate: 2.5 mM |