Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7KN1

Crystal structure of UDP-glucose-4-epimerase (galE) from Stenotrophomonas maltophila with bound NAD and formylated UDP-arabinopyranose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2019-11-21
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths72.270, 79.420, 153.850
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.080 - 1.450
R-factor0.1596
Rwork0.159
R-free0.17680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1udc
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMoRDa
Refinement softwarePHENIX (1.19rc-4022)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.08043.0801.490
High resolution limit [Å]1.4506.4801.450
Rmerge0.0790.0360.485
Rmeas0.0870.0400.530
Total number of observations917081
Number of reflections156730193311465
<I/σ(I)>13.4326.423.92
Completeness [%]99.898.9100
Redundancy5.8515.6526.03
CC(1/2)0.9970.9980.893
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5290StmaA.00085.a.B1.PW38702 at 24.25 mg/ml was combined 1:1 (0.4 uL protein/precipitant) with 0.2 M Ammonium citrate dibasic, pH 5.0, and 20% (w/v) PEG 3350 and stored at 14C. No additional ligand was added for crystallization. Tray 312986f3; puck ocs5-3.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon