7KIR
Crystal structure of inositol polyphosphate 1-phosphatase (INPP1) D54A mutant in complex with inositol (1,4)-bisphosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU R-AXIS II |
Temperature [K] | 277 |
Detector technology | IMAGE PLATE |
Collection date | 1998-01-01 |
Detector | RIGAKU RAXIS IIC |
Wavelength(s) | 1.5418 |
Spacegroup name | P 41 |
Unit cell lengths | 51.437, 51.437, 142.938 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.250 - 2.600 |
R-factor | 0.196 |
Rwork | 0.190 |
R-free | 0.24550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1inp |
RMSD bond length | 0.005 |
RMSD bond angle | 0.761 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.300 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.094 | 0.099 |
Number of reflections | 10601 | 929 |
<I/σ(I)> | 8.8 | |
Completeness [%] | 92.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 290 | Crystals were first grown in 0.1M sodium citrate pH 4.3, 16-18% PEG6K, 5 mM CaCl2. Then crystals were soaked with inositol (1,4)-bisphosphate for 1-3 hours |