7KE3
Heavy chain ferritin with C-terminal EBNA1 epitope
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-09 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 217.882, 217.882, 147.203 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.720 - 2.200 |
R-factor | 0.2422 |
Rwork | 0.241 |
R-free | 0.27050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6j4a |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18.2-3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.720 | 48.720 | 2.240 |
High resolution limit [Å] | 2.200 | 12.050 | 2.200 |
Rmerge | 0.336 | 0.056 | 2.549 |
Rmeas | 0.342 | 0.057 | 2.597 |
Rpim | 0.065 | 0.012 | 0.493 |
Total number of observations | 4871537 | 31305 | 240131 |
Number of reflections | 177978 | 1241 | 8703 |
<I/σ(I)> | 8.9 | 29.8 | 1.6 |
Completeness [%] | 99.9 | 98.6 | 99.8 |
Redundancy | 27.4 | 25.2 | 27.6 |
CC(1/2) | 0.999 | 1.000 | 0.907 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289.15 | 0.1M HEPES pH 7.0, 30% Jeffamine M-600 pH 7.0 |