7KD8
TtgR C137I I141W M167L F168Y mutant in complex with resveratrol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-30 |
Detector | DECTRIS EIGER2 X 9M |
Wavelength(s) | 1.07812 |
Spacegroup name | P 1 |
Unit cell lengths | 43.497, 43.587, 115.942 |
Unit cell angles | 97.97, 98.65, 96.76 |
Refinement procedure
Resolution | 25.650 - 1.710 |
R-factor | 0.1943 |
Rwork | 0.193 |
R-free | 0.24070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7k1a |
RMSD bond length | 0.005 |
RMSD bond angle | 0.711 |
Data reduction software | XDS (20200417) |
Data scaling software | XDS (20200417) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874+SVN) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.650 | 1.771 |
High resolution limit [Å] | 1.710 | 1.710 |
Rmerge | 0.046 | 0.578 |
Rmeas | 0.053 | 0.670 |
Rpim | 0.028 | |
Number of reflections | 82430 | 8133 |
<I/σ(I)> | 13.88 | 1.92 |
Completeness [%] | 91.8 | 91.33 |
Redundancy | 3.8 | 3.9 |
CC(1/2) | 0.998 | 0.901 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | Protein at 10.4 mg/ml (433 uM) incubated 30 min with 1 mM resveratrol dissolved in ethanol. 2 microliters of protein was mixed with 2 microliters of reservoir consisting of 12% MEPEG 2000, 5% MPD, 0.3 M MGCL2, 100 MM BISTRIS pH 6.5. The droplet was set on a siliconized glass cover slip to minimize loss of resveratrol. |