7KBI
Ricin bound to VHH antibody V5E1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU R-AXIS |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-06-01 |
| Detector | RIGAKU SATURN 944 |
| Wavelength(s) | 1.54 |
| Spacegroup name | P 63 |
| Unit cell lengths | 161.418, 161.418, 67.031 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 34.573 - 3.049 |
| R-factor | 0.2388 |
| Rwork | 0.237 |
| R-free | 0.27410 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2aa1 |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.543 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 3.100 |
| High resolution limit [Å] | 3.049 | 8.270 | 3.050 |
| Rmerge | 0.377 | 0.072 | 2.377 |
| Rmeas | 0.398 | 0.076 | 2.540 |
| Rpim | 0.126 | 0.024 | 0.880 |
| Number of reflections | 19234 | 1002 | 942 |
| <I/σ(I)> | 2.2 | ||
| Completeness [%] | 99.9 | 98.7 | 100 |
| Redundancy | 9.9 | 9.5 | 8.2 |
| CC(1/2) | 0.998 | 0.586 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 293 | 340 mM ammonium fluoride and 22% PEG 3,350. |






