7K9O
Co-crystal structure of alpha glucosidase with compound 3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-04-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 32 |
Unit cell lengths | 102.716, 102.716, 239.625 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.938 - 2.302 |
R-factor | 0.2103 |
Rwork | 0.210 |
R-free | 0.23830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5f0e |
RMSD bond length | 0.003 |
RMSD bond angle | 0.682 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3228) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.938 | 2.384 |
High resolution limit [Å] | 2.302 | 2.302 |
Rmerge | 0.139 | 0.914 |
Rmeas | 0.149 | 1.007 |
Rpim | 0.054 | 0.416 |
Number of reflections | 125193 | 12513 |
<I/σ(I)> | 8.09 | 1.02 |
Completeness [%] | 99.9 | 99.17 |
Redundancy | 7.2 | 5.6 |
CC(1/2) | 0.992 | 0.445 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 297 | 0.09M NPS, 0.1M Buffer System 1 pH7.0, 29%v/v P500MME_P20K (Morpheus screen, condition C1) |