7K5M
CRYSTAL STRUCTURE OF HBV CAPSID Y132A MUTANT IN COMPLEX WITH N-(3-chloro-4-fluorophenyl)-3-phenyl-1,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridine-5-carboxamide AT 2.65A RESOLUTION
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-01-22 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 151.580, 87.960, 106.710 |
Unit cell angles | 90.00, 103.53, 90.00 |
Refinement procedure
Resolution | 48.035 - 2.650 |
R-factor | 0.2442 |
Rwork | 0.242 |
R-free | 0.27570 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | internal model |
RMSD bond length | 0.003 |
RMSD bond angle | 0.683 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev-1932) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.035 | 48.035 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.075 | 0.489 |
Rmeas | 0.091 | 0.024 |
Total number of observations | 108596 | |
Number of reflections | 37097 | 421 |
<I/σ(I)> | 10.37 | 2.1 |
Completeness [%] | 93.2 | 95.1 |
Redundancy | 2.93 | 2.87 |
CC(1/2) | 0.998 | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1M ammonium citrate/citric acid pH 6.5, 9% isopropanol, 10% PEG 3350, 10% MPD |