7K5G
1.95 A resolution structure of WT BfrB from Pseudomonas aeruginosa in complex with a protein-protein interaction inhibitor KM-5-28
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 129.739, 194.791, 202.343 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.750 - 1.950 |
R-factor | 0.1593 |
Rwork | 0.158 |
R-free | 0.19270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5d8o |
RMSD bond length | 0.010 |
RMSD bond angle | 0.905 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER |
Refinement software | PHENIX (1.17rc2_3615) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.700 | 48.700 | 1.980 |
High resolution limit [Å] | 1.950 | 10.680 | 1.950 |
Rmerge | 0.108 | 0.033 | 1.047 |
Total number of observations | 1248238 | 7926 | 63602 |
Number of reflections | 185188 | 1222 | 9139 |
<I/σ(I)> | 13.5 | 45.4 | 2.2 |
Completeness [%] | 100.0 | 98.3 | 100 |
Redundancy | 6.7 | 6.5 | 7 |
CC(1/2) | 0.998 | 0.999 | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 291 | 30% (v/v) PEG 200, 0.1M sodium acetate, 0.1M NaCl |