Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7JZK

Crystal structure of LAIR1 ectodomain (from MGD21) in complex with Plasmodium RIFIN (PF3D7_0401300) V2 domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2018-07-23
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameC 1 2 1
Unit cell lengths87.118, 95.839, 71.828
Unit cell angles90.00, 103.97, 90.00
Refinement procedure
Resolution43.170 - 2.457
R-factor0.2254
Rwork0.223
R-free0.27510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7jzi
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.490
High resolution limit [Å]2.4506.6502.450
Rmerge0.1040.0600.423
Rmeas0.1270.0740.514
Rpim0.0720.0430.288
Total number of observations57799
Number of reflections19253897970
<I/σ(I)>6.7
Completeness [%]92.38393.9
Redundancy32.62.7
CC(1/2)0.9920.855
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1 M NaCl, 0.1 M Tris HCl pH 8.5, 20% PEG 3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon