7JT8
Apo structure of a pseudomurein peptide ligase type E from Methanothermus fervidus
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-11-18 |
| Detector | ADSC QUANTUM 210r |
| Wavelength(s) | 0.9537 |
| Spacegroup name | P 61 |
| Unit cell lengths | 119.783, 119.783, 70.746 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 34.580 - 1.840 |
| R-factor | 0.1771 |
| Rwork | 0.175 |
| R-free | 0.21110 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4qdi |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.858 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | MrBUMP |
| Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 34.580 | 1.870 |
| High resolution limit [Å] | 1.840 | 1.840 |
| Rmerge | 0.091 | 0.878 |
| Number of reflections | 50277 | 3066 |
| <I/σ(I)> | 29.3 | 4.4 |
| Completeness [%] | 99.8 | 97.9 |
| Redundancy | 22.4 | |
| CC(1/2) | 1.000 | 0.910 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.4 | 293 | 0.2 M ammonium sulfate, 30% w/v PEG4000, pH 5.4 |






