7JMV
Crystal structure of the pea pathogenicity protein 2 from Madurella mycetomatis complexed with 4-nitrocatechol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97934 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 98.740, 98.740, 62.287 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.760 - 1.570 |
R-factor | 0.1772 |
Rwork | 0.177 |
R-free | 0.19070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7jmr |
RMSD bond length | 0.010 |
RMSD bond angle | 1.038 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.760 | 1.600 |
High resolution limit [Å] | 1.570 | 1.570 |
Number of reflections | 49087 | 3019 |
<I/σ(I)> | 41.4 | |
Completeness [%] | 99.9 | |
Redundancy | 9.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 15 % PEG 3350, 0.2 M Calcium Chloride, 0.1 M MES |