7JMM
Crystal structure of the substrate-binding domain of E. coli DnaK in complex with the peptide RAKNIILLSR
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2019-06-27 |
| Detector | DECTRIS PILATUS3 R 200K-A |
| Wavelength(s) | 1.5418 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 38.126, 95.494, 117.374 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 47.790 - 2.560 |
| R-factor | 0.2217 |
| Rwork | 0.217 |
| R-free | 0.32670 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1dkz |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.523 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.600 |
| High resolution limit [Å] | 2.560 | 6.940 | 2.560 |
| Rmerge | 0.148 | 0.083 | |
| Rmeas | 0.161 | 0.093 | |
| Rpim | 0.079 | 0.040 | |
| Total number of observations | 43951 | ||
| Number of reflections | 7236 | 419 | 350 |
| <I/σ(I)> | 5.2 | ||
| Completeness [%] | 99.9 | 100 | 98.9 |
| Redundancy | 6.1 | 5.3 | 5.1 |
| CC(1/2) | 0.995 | 0.435 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 2.4 M (NH4)2SO4, 0.1 M K3PO4 |






