7JHX
Crystal structure of hEPG5 LIR/GABARAPL1 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-06 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.000010 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 122.954, 33.082, 78.858 |
Unit cell angles | 90.00, 114.28, 90.00 |
Refinement procedure
Resolution | 57.000 - 1.910 |
R-factor | 0.1991 |
Rwork | 0.197 |
R-free | 0.24470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2r2q |
Data reduction software | DIALS |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER |
Refinement software | PHENIX (1.14) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 57.000 | 57.000 | 1.960 |
High resolution limit [Å] | 1.910 | 8.540 | 1.910 |
Rmerge | 0.148 | 0.067 | 0.762 |
Rmeas | 0.177 | 0.081 | 0.916 |
Rpim | 0.097 | 0.045 | 0.504 |
Total number of observations | 68435 | 843 | 2867 |
Number of reflections | 21346 | 289 | 989 |
<I/σ(I)> | 4.6 | 8.9 | 1.6 |
Completeness [%] | 93.4 | 99 | 58.7 |
Redundancy | 3.2 | 2.9 | 2.9 |
CC(1/2) | 0.985 | 0.985 | 0.599 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 0.2 M ammonium sulfate, 0.1 MES buffer pH 5.5, 29% (w/v) PEG 4000 |