7JH4
Crystal structure of NAD(P)H-flavin oxidoreductase (NfoR) from S. aureus complexed with reduced FMN and NAD+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-06-21 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.97856 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 174.802, 84.844, 107.701 |
Unit cell angles | 90.00, 124.30, 90.00 |
Refinement procedure
Resolution | 36.100 - 2.000 |
R-factor | 0.1712 |
Rwork | 0.169 |
R-free | 0.20740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2hay |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.050 |
High resolution limit [Å] | 2.000 | 5.480 | 2.020 |
Rmerge | 0.058 | 0.045 | 0.802 |
Rmeas | 0.068 | 0.053 | 0.957 |
Rpim | 0.035 | 0.028 | 0.516 |
Number of reflections | 84335 | 4271 | 3284 |
<I/σ(I)> | 8.8 | ||
Completeness [%] | 95.9 | 94.4 | 75.1 |
Redundancy | 3.7 | 3.6 | 3.1 |
CC(1/2) | 0.994 | 0.588 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 293 | 30% PEG4000, 210 mM ammonium acetate, 100 mM sodium citrate, pH 5.6 |