7IAK
Group deposition of ZIKV NS2B-NS3 protease in complex with inhibitors from ASAP Discovery Consortium -- Crystal Structure of ZIKV NS2B-NS3 protease in complex with ASAP-0029797-001
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-07-31 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92134 |
Spacegroup name | P 43 2 2 |
Unit cell lengths | 42.544, 42.544, 216.420 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.100 - 2.152 |
R-factor | 0.2348 |
Rwork | 0.232 |
R-free | 0.28100 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5gpi |
RMSD bond length | 0.007 |
RMSD bond angle | 0.940 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.15) |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.4 (23-JAN-2024)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 54.100 | 54.100 | 2.270 |
High resolution limit [Å] | 2.150 | 6.800 | 2.150 |
Rmerge | 0.438 | 0.091 | 7.743 |
Rmeas | 0.447 | 0.093 | 7.904 |
Rpim | 0.091 | 0.021 | 1.570 |
Total number of observations | 277742 | 8356 | 40528 |
Number of reflections | 11740 | ||
<I/σ(I)> | 6.7 | 21.5 | 0.6 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 23.7 | 17.5 | 24.8 |
CC(1/2) | 0.997 | 0.997 | 0.624 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.8 | 298 | 30% w/v PEG 2000, 0.2M Ammonium sulfate, 0.1M acetate (pH 4.8) |