7HNQ
PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z30620520
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-07-04 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92134 |
Spacegroup name | I 4 |
Unit cell lengths | 95.389, 95.389, 45.741 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.280 - 1.370 |
R-factor | 0.1801 |
Rwork | 0.179 |
R-free | 0.19640 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.011 |
RMSD bond angle | 1.750 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.240 | 41.240 | 1.390 |
High resolution limit [Å] | 1.370 | 7.500 | 1.370 |
Rmerge | 0.110 | 0.055 | 2.401 |
Rmeas | 0.115 | 0.058 | 2.585 |
Rpim | 0.032 | 0.017 | 0.936 |
Total number of observations | 528335 | 3483 | 15331 |
Number of reflections | 43189 | 289 | 2076 |
<I/σ(I)> | 13.7 | 80.8 | 0.5 |
Completeness [%] | 99.7 | 99.5 | 97.3 |
Redundancy | 12.2 | 12.1 | 7.4 |
CC(1/2) | 0.999 | 0.996 | 0.338 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 4 % PEG 400, 2 M AmmSO4, 0.1 M HEPES pH 8 |