7HNA
PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z1929757385
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-07-04 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92134 |
Spacegroup name | I 4 |
Unit cell lengths | 95.423, 95.423, 45.869 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.370 - 1.290 |
R-factor | 0.1796 |
Rwork | 0.179 |
R-free | 0.19550 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.013 |
RMSD bond angle | 1.910 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.340 | 41.340 | 1.310 |
High resolution limit [Å] | 1.290 | 7.060 | 1.290 |
Rmerge | 0.080 | 0.037 | 1.417 |
Rmeas | 0.083 | 0.039 | 1.656 |
Rpim | 0.024 | 0.012 | 0.834 |
Total number of observations | 567038 | 4270 | 8135 |
Number of reflections | 51603 | 347 | 2234 |
<I/σ(I)> | 17.3 | 96.7 | 0.6 |
Completeness [%] | 99.1 | 99.6 | 87.8 |
Redundancy | 11 | 12.3 | 3.6 |
CC(1/2) | 0.999 | 1.000 | 0.326 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 4 % PEG 400, 2 M AmmSO4, 0.1 M HEPES pH 8 |