7HN4
PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z56827661
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-05-24 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92124 |
Spacegroup name | I 4 |
Unit cell lengths | 95.388, 95.388, 45.754 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.290 - 1.190 |
R-factor | 0.1782 |
Rwork | 0.177 |
R-free | 0.19520 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.013 |
RMSD bond angle | 1.874 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 41.250 | 41.250 | 1.210 |
High resolution limit [Å] | 1.190 | 6.520 | 1.190 |
Rmerge | 0.056 | 0.053 | 0.696 |
Rmeas | 0.059 | 0.056 | 0.945 |
Rpim | 0.017 | 0.017 | 0.635 |
Total number of observations | 586822 | 5455 | 2022 |
Number of reflections | 60873 | 434 | 1389 |
<I/σ(I)> | 19.1 | 87.1 | 0.5 |
Completeness [%] | 92.5 | 99.7 | 43.6 |
Redundancy | 9.6 | 12.6 | 1.5 |
CC(1/2) | 1.000 | 0.995 | 0.448 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 4 % PEG 400, 2 M AmmSO4, 0.1 M HEPES pH 8 |