7HN1
PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z2065616520
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-05-24 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92124 |
Spacegroup name | I 4 |
Unit cell lengths | 95.450, 95.450, 45.780 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.770 - 1.470 |
R-factor | 0.1965 |
Rwork | 0.195 |
R-free | 0.22900 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.010 |
RMSD bond angle | 1.564 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.15) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.750 | 33.750 | 1.510 |
High resolution limit [Å] | 1.470 | 6.570 | 1.470 |
Rmerge | 0.226 | 0.082 | 3.199 |
Rmeas | 0.235 | 0.086 | 3.392 |
Rpim | 0.064 | 0.024 | 1.107 |
Total number of observations | 441665 | 5206 | 23176 |
Number of reflections | 35195 | 421 | 2576 |
<I/σ(I)> | 8.3 | 30.1 | 0.8 |
Completeness [%] | 100.0 | 99.1 | 100 |
Redundancy | 12.5 | 12.4 | 9 |
CC(1/2) | 0.997 | 0.997 | 0.378 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 4 % PEG 400, 2 M AmmSO4, 0.1 M HEPES pH 8 |