7HMO
PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z198194394
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-05-24 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92124 |
Spacegroup name | I 4 |
Unit cell lengths | 95.648, 95.648, 45.813 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 67.630 - 1.300 |
R-factor | 0.1807 |
Rwork | 0.180 |
R-free | 0.20100 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.011 |
RMSD bond angle | 1.748 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.620 | 67.620 | 1.320 |
High resolution limit [Å] | 1.300 | 7.120 | 1.300 |
Rmerge | 0.106 | 0.056 | 2.097 |
Rmeas | 0.110 | 0.058 | 2.248 |
Rpim | 0.031 | 0.016 | 0.789 |
Total number of observations | 566849 | 4271 | 9337 |
Number of reflections | 45987 | 340 | 1202 |
<I/σ(I)> | 13.7 | 77.7 | 0.6 |
Completeness [%] | 90.2 | 99.7 | 48.4 |
Redundancy | 12.3 | 12.6 | 7.8 |
CC(1/2) | 0.998 | 1.000 | 0.396 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 4 % PEG 400, 2 M AmmSO4, 0.1 M HEPES pH 8 |