7HMA
PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z291279160
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-05-23 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92124 |
Spacegroup name | I 4 |
Unit cell lengths | 95.471, 95.471, 45.711 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.780 - 1.150 |
R-factor | 0.1769 |
Rwork | 0.176 |
R-free | 0.18910 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.013 |
RMSD bond angle | 1.894 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.730 | 47.730 | 1.170 |
High resolution limit [Å] | 1.150 | 6.300 | 1.150 |
Rmerge | 0.043 | 0.054 | 0.460 |
Rmeas | 0.045 | 0.057 | 0.651 |
Rpim | 0.013 | 0.018 | 0.460 |
Total number of observations | 588478 | 6088 | 470 |
Number of reflections | 61858 | 482 | 448 |
<I/σ(I)> | 26.4 | 88.2 | 0.8 |
Completeness [%] | 84.6 | 99.8 | 12.5 |
Redundancy | 9.5 | 12.6 | 1 |
CC(1/2) | 0.999 | 0.985 | 0.471 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 4 % PEG 400, 2 M AmmSO4, 0.1 M HEPES pH 8 |