7HM2
PanDDA analysis group deposition -- Crystal Structure of TRIM21 in complex with Z32400357
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-05-24 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.92124 |
Spacegroup name | I 4 |
Unit cell lengths | 95.294, 95.294, 45.864 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 67.380 - 1.150 |
R-factor | 0.1806 |
Rwork | 0.180 |
R-free | 0.20020 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.013 |
RMSD bond angle | 1.930 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 67.380 | 67.380 | 1.170 |
High resolution limit [Å] | 1.150 | 6.300 | 1.150 |
Rmerge | 0.048 | 0.068 | 0.561 |
Rmeas | 0.051 | 0.071 | 0.793 |
Rpim | 0.014 | 0.023 | 0.561 |
Total number of observations | 587265 | 6004 | 465 |
Number of reflections | 62218 | 480 | 455 |
<I/σ(I)> | 23.9 | 79.8 | 0.7 |
Completeness [%] | 85.3 | 99.9 | 12.8 |
Redundancy | 9.4 | 12.5 | 1 |
CC(1/2) | 0.998 | 0.960 | 0.508 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | 4 % PEG 400, 2 M AmmSO4, 0.1 M HEPES pH 8 |