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7H6W

Group deposition for crystallographic fragment screening of Chikungunya virus nsP3 macrodomain -- Crystal structure of Chikungunya virus nsP3 macrodomain in complex with Z1267773765 (CHIKV_MacB-x0398)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04-1
Synchrotron siteDiamond
BeamlineI04-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-10-07
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.92124
Spacegroup nameP 31
Unit cell lengths87.503, 87.503, 85.706
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution75.780 - 1.380
R-factor0.18376
Rwork0.182
R-free0.21083
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.009
RMSD bond angle1.654
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]75.7901.400
High resolution limit [Å]1.3801.380
Rmerge0.0742.272
Rmeas0.0782.486
Rpim0.0240.997
Total number of observations142786345190
Number of reflections1510387528
<I/σ(I)>13.10.3
Completeness [%]100.0
Redundancy9.56
CC(1/2)0.9990.319
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.8293.150.1 M Potassium thiocyanate, 0.1 M Sodium bromide, 0.1 M Tris, pH 7.8, 25 % PEG Smear Broad

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PDB entries from 2024-10-09

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