7H4D
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z99601600 (A71EV2A-x0732)
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-12-03 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.94055 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 87.617, 56.954, 32.469 |
Unit cell angles | 90.00, 91.49, 90.00 |
Refinement procedure
Resolution | 47.750 - 1.940 |
R-factor | 0.2011 |
Rwork | 0.197 |
R-free | 0.28208 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.350 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.740 | 1.990 |
High resolution limit [Å] | 1.940 | 1.940 |
Rmerge | 0.175 | 3.558 |
Rmeas | 0.189 | 3.825 |
Rpim | 0.070 | 1.397 |
Total number of observations | 84222 | 5640 |
Number of reflections | 11789 | 767 |
<I/σ(I)> | 9.6 | 0.5 |
Completeness [%] | 99.2 | |
Redundancy | 7.1 | 7.4 |
CC(1/2) | 0.997 | 0.329 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |