7H3D
Group deposition for crystallographic fragment screening of Coxsackievirus A16 (G-10) 2A protease -- Crystal structure of Coxsackievirus A16 (G-10) 2A protease in complex with Z558511008 (A71EV2A-x0365)
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I03 |
| Synchrotron site | Diamond |
| Beamline | I03 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-10-10 |
| Detector | DECTRIS EIGER2 XE 16M |
| Wavelength(s) | 0.94055 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 72.942, 60.675, 32.470 |
| Unit cell angles | 90.00, 92.93, 90.00 |
Refinement procedure
| Resolution | 46.620 - 1.350 |
| R-factor | 0.30678 |
| Rwork | 0.305 |
| R-free | 0.34233 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.584 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.650 | 1.370 |
| High resolution limit [Å] | 1.350 | 1.350 |
| Rmerge | 0.166 | 4.387 |
| Rmeas | 0.179 | 4.767 |
| Rpim | 0.068 | 1.839 |
| Total number of observations | 210397 | 9756 |
| Number of reflections | 30655 | 1491 |
| <I/σ(I)> | 6.1 | 0.3 |
| Completeness [%] | 98.5 | |
| Redundancy | 6.9 | 6.5 |
| CC(1/2) | 0.996 | 0.262 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.05 | 293.15 | 0.1 M MES, pH 6.05, 16 % PEG 20,000 |
