7H17
Crystal structure of SARS-CoV-2 NSP3 Macrodomain in complex with ASAP-0013389-001
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-07-17 |
| Detector | DECTRIS EIGER2 XE 9M |
| Wavelength(s) | 0.9212 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 38.330, 33.097, 64.297 |
| Unit cell angles | 90.00, 101.53, 90.00 |
Refinement procedure
| Resolution | 37.560 - 1.190 |
| R-factor | 0.1597 |
| Rwork | 0.158 |
| R-free | 0.18370 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.013 |
| RMSD bond angle | 1.210 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | BUSTER (2.10.4) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 37.560 | 1.250 |
| High resolution limit [Å] | 1.190 | 1.190 |
| Rmerge | 0.054 | 0.471 |
| Rmeas | 0.059 | 0.651 |
| Rpim | 0.024 | 0.447 |
| Total number of observations | 224474 | 3838 |
| Number of reflections | 42939 | 2364 |
| <I/σ(I)> | 13.8 | 1.4 |
| Completeness [%] | 84.2 | |
| Redundancy | 5.2 | 1.6 |
| CC(1/2) | 0.999 | 0.695 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M MES (pH 6.50) and 30 % w/v PEG 4000 |
