7GXE
Crystal Structure of B-cell lymphoma 6 protein BTB domain in complex with ligand 8 at 9.05 MGy X-ray dose.
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-31 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 67.780, 67.780, 166.700 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 33.980 - 1.950 |
R-factor | 0.177 |
Rwork | 0.175 |
R-free | 0.20200 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.010 |
RMSD bond angle | 0.920 |
Data reduction software | Aimless (0.5.32) |
Data scaling software | Aimless (0.5.32) |
Phasing software | BUSTER (2.10.3) |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.980 | 33.980 | 2.000 |
High resolution limit [Å] | 1.950 | 8.940 | 1.950 |
Rmerge | 0.072 | 0.029 | 0.563 |
Rmeas | 0.076 | 0.031 | 0.596 |
Rpim | 0.025 | 0.011 | 0.195 |
Total number of observations | 155799 | 1603 | 11082 |
Number of reflections | 17376 | 246 | 1197 |
<I/σ(I)> | 15.8 | 41.8 | 3.7 |
Completeness [%] | 100.0 | 98.9 | 100 |
Redundancy | 9 | 6.5 | 9.3 |
CC(1/2) | 0.999 | 0.999 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 1.0 M K2HPO4, 0.7 M NaH2PO4, 75 mM sodium acetate pH 4.5, 2% DMSO |