7GXD
Crystal Structure of B-cell lymphoma 6 protein BTB domain in complex with ligand 8 at 7.24 MGy X-ray dose.
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I24 |
| Synchrotron site | Diamond |
| Beamline | I24 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-07-31 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.9686 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 67.600, 67.600, 166.480 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 33.920 - 1.950 |
| R-factor | 0.178 |
| Rwork | 0.177 |
| R-free | 0.20800 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.010 |
| RMSD bond angle | 0.930 |
| Data reduction software | Aimless (0.5.32) |
| Data scaling software | Aimless (0.5.32) |
| Phasing software | BUSTER (2.10.3) |
| Refinement software | BUSTER (2.10.3) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 33.920 | 33.920 | 2.000 |
| High resolution limit [Å] | 1.950 | 8.940 | 1.950 |
| Rmerge | 0.087 | 0.052 | 0.422 |
| Rmeas | 0.092 | 0.056 | 0.447 |
| Rpim | 0.030 | 0.021 | 0.144 |
| Total number of observations | 155548 | 1575 | 11004 |
| Number of reflections | 17211 | 228 | 1187 |
| <I/σ(I)> | 13.2 | 27.7 | 4.5 |
| Completeness [%] | 100.0 | 98.7 | 100 |
| Redundancy | 9 | 6.9 | 9.3 |
| CC(1/2) | 0.998 | 0.996 | 0.938 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 1.0 M K2HPO4, 0.7 M NaH2PO4, 75 mM sodium acetate pH 4.5, 2% DMSO |
