7GWC
Crystal Structure of B-cell lymphoma 6 protein BTB domain in complex with ligand 5 at 15.48 MGy X-ray dose.
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9688 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 67.710, 67.710, 166.350 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 33.920 - 1.750 |
R-factor | 0.178 |
Rwork | 0.177 |
R-free | 0.19600 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.010 |
RMSD bond angle | 0.890 |
Data scaling software | Aimless (0.7.4) |
Phasing software | BUSTER (2.10.3) |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.920 | 33.920 | 1.780 |
High resolution limit [Å] | 1.750 | 9.090 | 1.750 |
Rmerge | 0.091 | 0.045 | 1.405 |
Rmeas | 0.097 | 0.049 | 1.485 |
Rpim | 0.032 | 0.019 | 0.471 |
Total number of observations | 213674 | 1583 | 11745 |
Number of reflections | 23694 | 236 | 1278 |
<I/σ(I)> | 11.4 | 26.4 | 1.6 |
Completeness [%] | 100.0 | 98.8 | 100 |
Redundancy | 9 | 6.7 | 9.2 |
CC(1/2) | 0.998 | 0.997 | 0.653 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 1.0 M K2HPO4, 0.7 M NaH2PO4, 75 mM sodium acetate pH 4.5, 2% DMSO |