7GU8
PanDDA analysis group deposition of ground-state model of PTP1B, using pre-clustering, cluster16
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 89.388, 89.388, 106.155 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 77.410 - 1.590 |
R-factor | 0.2013 |
Rwork | 0.200 |
R-free | 0.22300 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 77.412 | 77.412 | 1.690 |
High resolution limit [Å] | 1.590 | 4.770 | 1.590 |
Rmerge | 0.057 | 0.037 | 1.116 |
Rmeas | 0.063 | 0.041 | 1.242 |
Total number of observations | 663902 | ||
Number of reflections | 126932 | 4744 | 20487 |
<I/σ(I)> | 13.05 | 39.81 | 1.31 |
Completeness [%] | 99.9 | 99.9 | 99.6 |
CC(1/2) | 0.999 | 0.998 | 0.504 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol |