7GTP
PanDDA Analysis group deposition -- Crystal structure of PTP1B in complex with FMOPL000688a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-09-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 90.097, 90.097, 107.174 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 78.030 - 2.470 |
R-factor | 0.1981 |
Rwork | 0.196 |
R-free | 0.25220 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.039 |
RMSD bond angle | 1.352 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 78.027 | 78.027 | 2.620 |
High resolution limit [Å] | 2.470 | 7.390 | 2.470 |
Rmerge | 0.155 | 0.042 | 0.908 |
Rmeas | 0.172 | 0.046 | 1.009 |
Total number of observations | 185078 | ||
Number of reflections | 34838 | 1312 | 5637 |
<I/σ(I)> | 9.04 | 32.05 | 1.7 |
Completeness [%] | 99.9 | 99.8 | 99.6 |
CC(1/2) | 0.994 | 0.999 | 0.508 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 0.3 M magnesium acetate, 0.1 M HEPES pH 7.5, 0.1% beta-mercaptoethanol, 13-14% PEG 8000, 2% ethanol |