7GLH
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with PET-UNK-b38839dc-1 (Mpro-P1981)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-08-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91808 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.151, 100.634, 104.935 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.320 - 1.906 |
R-factor | 0.2236 |
Rwork | 0.222 |
R-free | 0.25710 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.950 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.4 (20-APR-2021)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.632 | 2.145 |
High resolution limit [Å] | 1.906 | 1.906 |
Rmerge | 0.137 | 1.230 |
Rmeas | 0.149 | 1.337 |
Rpim | 0.057 | 0.518 |
Total number of observations | 250409 | 12082 |
Number of reflections | 36650 | 1832 |
<I/σ(I)> | 10.1 | 1.6 |
Completeness [%] | 64.3 | |
Redundancy | 6.8 | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 15% PEG 4K, 5% DMSO, 0.1M MES pH 6.5 |