7GHM
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with ERI-UCB-ce40166b-17 (Mpro-P0008)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-02-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91199 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 67.340, 98.580, 103.010 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 71.220 - 1.690 |
R-factor | 0.2067 |
Rwork | 0.205 |
R-free | 0.23430 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.030 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.4 (14-JUN-2023)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 71.223 | 1.747 |
High resolution limit [Å] | 1.522 | 1.522 |
Rmerge | 0.098 | 1.023 |
Rmeas | 0.107 | 1.109 |
Rpim | 0.041 | 0.425 |
Total number of observations | 405044 | 19492 |
Number of reflections | 60055 | 3004 |
<I/σ(I)> | 11.4 | 1.9 |
Completeness [%] | 56.9 | |
Redundancy | 6.7 | 6.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 15% PEG 4K, 5% DMSO, 0.1M MES pH 6.5 |