7GHA
Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with DAN-LON-a5fc619e-8 (Mpro-x3077)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-05-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91188 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.458, 53.128, 44.169 |
Unit cell angles | 90.00, 102.46, 90.00 |
Refinement procedure
Resolution | 55.390 - 1.720 |
R-factor | 0.1843 |
Rwork | 0.182 |
R-free | 0.22520 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.970 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.3 (29-NOV-2019)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 55.380 | 1.750 |
High resolution limit [Å] | 1.720 | 1.720 |
Rmerge | 0.089 | 1.567 |
Rmeas | 0.105 | 1.894 |
Rpim | 0.055 | 1.044 |
Total number of observations | 95434 | 4187 |
Number of reflections | 27270 | 1388 |
<I/σ(I)> | 9.5 | 0.5 |
Completeness [%] | 99.5 | |
Redundancy | 3.5 | 3 |
CC(1/2) | 0.998 | 0.269 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 15% PEG 4K, 5% DMSO, 0.1M MES pH 6.5 |