7GAJ
PanDDA analysis group deposition -- Crystal Structure of MAP1LC3B in complex with Z285233820
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92124 |
Spacegroup name | P 43 |
Unit cell lengths | 61.003, 61.003, 35.331 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.170 - 1.890 |
R-factor | 0.1858 |
Rwork | 0.184 |
R-free | 0.22890 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 8q53 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.550 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.7) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.150 | 43.150 | 1.930 |
High resolution limit [Å] | 1.890 | 9.070 | 1.890 |
Rmerge | 0.113 | 0.044 | 5.099 |
Rmeas | 0.118 | 0.047 | 5.288 |
Rpim | 0.032 | 0.014 | 1.395 |
Total number of observations | 145177 | 1183 | 9643 |
Number of reflections | 10634 | 112 | 680 |
<I/σ(I)> | 10.5 | 57.9 | 0.3 |
Completeness [%] | 100.0 | 99.2 | 100 |
Redundancy | 13.7 | 10.6 | 14.2 |
CC(1/2) | 0.999 | 1.000 | 0.323 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.7 | 293 | 36% PEG 8000, 0.1M acetate pH 4.7 |