7GA9
PanDDA analysis group deposition -- Crystal Structure of MAP1LC3B in complex with Z1198177230
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-02-08 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.92124 |
| Spacegroup name | P 43 |
| Unit cell lengths | 60.980, 60.980, 35.320 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 30.510 - 2.170 |
| R-factor | 0.1824 |
| Rwork | 0.180 |
| R-free | 0.24630 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 8q53 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.518 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.9) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 30.490 | 30.490 | 2.230 |
| High resolution limit [Å] | 2.170 | 9.710 | 2.170 |
| Rmerge | 0.199 | 0.063 | 3.303 |
| Rmeas | 0.208 | 0.067 | 3.433 |
| Rpim | 0.058 | 0.020 | 0.931 |
| Total number of observations | 93140 | 862 | 6872 |
| Number of reflections | 7021 | 88 | 515 |
| <I/σ(I)> | 8.8 | 24.3 | 0.9 |
| Completeness [%] | 99.7 | 97 | 98.4 |
| Redundancy | 13.3 | 9.8 | 13.3 |
| CC(1/2) | 0.906 | 0.996 | 0.353 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 4.7 | 293 | 36% PEG 8000, 0.1M acetate pH 4.7 |
