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7G5A

Crystal Structure of rat Autotaxin in complex with 2-tert-butyl-6-(4-chlorophenyl)-4-methylsulfonylpyridine, i.e. SMILES c1(c2ccc(cc2)Cl)cc(cc(n1)C(C)(C)C)S(=O)(=O)C with IC50=2.51866 microM

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2013-03-04
DetectorPSI PILATUS 6M
Wavelength(s)0.999970
Spacegroup nameP 21 21 21
Unit cell lengths83.923, 91.947, 119.155
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.580 - 1.670
R-factor0.188
Rwork0.186
R-free0.22220
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.018
RMSD bond angle1.813
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.58048.5801.710
High resolution limit [Å]1.6707.4701.670
Rmerge0.1270.0331.303
Rmeas0.1380.0371.411
Total number of observations711692
Number of reflections10738213587849
<I/σ(I)>12.5540.741.8
Completeness [%]100.099.299.9
Redundancy6.6286.0576.761
CC(1/2)0.9980.9990.596
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.529315.3 mg/mL protein in 20mM BICINE/NaOH pH8.5, 150mM NaCl, 0.02% NaN3 mixed 50-70% with 50-30% reservoir consisting of 11-17% PEG3350, 0.1M Na-acetate pH4.5, 0.2M Ca-acetate, total volume 200nL

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