Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7G4M

Crystal Structure of rat Autotaxin in complex with N-benzyl-2-(4-methyl-5-oxo-1H-1,2,4-triazol-3-yl)-N-phenylacetamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2013-02-09
DetectorPSI PILATUS 6M
Wavelength(s)1.000010
Spacegroup nameP 21 21 21
Unit cell lengths84.533, 92.159, 120.559
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.320 - 2.080
R-factor0.2059
Rwork0.204
R-free0.24890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.009
RMSD bond angle1.359
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.32043.3202.130
High resolution limit [Å]2.0809.3002.080
Rmerge0.1350.0342.180
Rmeas0.1470.0372.371
Total number of observations381301
Number of reflections572817414152
<I/σ(I)>10.9737.771.2
Completeness [%]99.998.7100
Redundancy6.6575.9996.508
CC(1/2)0.9980.9990.402
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.529315.3 mg/mL protein in 20mM BICINE/NaOH pH8.5, 150mM NaCl, 0.02% NaN3 mixed 50-70% with 50-30% reservoir consisting of 11-17% PEG3350, 0.1M Na-acetate pH4.5, 0.2M Ca-acetate, total volume 200nL

232829

PDB entries from 2025-03-12

PDB statisticsPDBj update infoContact PDBjnumon