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7G47

Crystal Structure of rat Autotaxin in complex with 3-[4-(cyclopropylmethoxy)naphthalen-2-yl]-4-methyl-1H-1,2,4-triazol-5-one

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2013-02-08
DetectorPSI PILATUS 6M
Wavelength(s)1.000010
Spacegroup nameP 21 21 21
Unit cell lengths83.858, 91.338, 118.705
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.450 - 1.940
R-factor0.1841
Rwork0.182
R-free0.21790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.011
RMSD bond angle1.416
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.45048.4501.990
High resolution limit [Å]1.9408.6801.940
Rmerge0.1110.0271.088
Rmeas0.1210.0301.179
Total number of observations452634
Number of reflections681508734996
<I/σ(I)>13.5647.411.97
Completeness [%]99.998.5100
Redundancy6.6425.5116.737
CC(1/2)0.9980.9990.658
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.529315.3 mg/mL protein in 20mM BICINE/NaOH pH8.5, 150mM NaCl, 0.02% NaN3 mixed 50-70% with 50-30% reservoir consisting of 11-17% PEG3350, 0.1M Na-acetate pH4.5, 0.2M Ca-acetate, total volume 200nL

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