7G38
Crystal Structure of rat Autotaxin in complex with 3-[3-[[(4-bromophenyl)methylamino]methyl]indol-1-yl]-N-methylpropanamide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X10SA |
| Synchrotron site | SLS |
| Beamline | X10SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2013-05-04 |
| Detector | PSI PILATUS 6M |
| Wavelength(s) | 0.999960 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 83.959, 91.792, 119.458 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.900 - 1.490 |
| R-factor | 0.1884 |
| Rwork | 0.187 |
| R-free | 0.21500 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | inhouse model |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.567 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 45.900 | 45.900 | 1.530 |
| High resolution limit [Å] | 1.490 | 6.660 | 1.490 |
| Rmerge | 0.085 | 0.035 | 1.492 |
| Rmeas | 0.092 | 0.039 | 1.619 |
| Total number of observations | 993449 | ||
| Number of reflections | 150303 | 1872 | 10935 |
| <I/σ(I)> | 12.35 | 39.29 | 1.29 |
| Completeness [%] | 99.6 | 99.2 | 99.1 |
| Redundancy | 6.61 | 6.228 | 6.45 |
| CC(1/2) | 0.999 | 0.999 | 0.474 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 293 | 15.3 mg/mL protein in 20mM BICINE/NaOH pH8.5, 150mM NaCl, 0.02% NaN3 mixed 50-70% with 50-30% reservoir consisting of 11-17% PEG3350, 0.1M Na-acetate pH4.5, 0.2M Ca-acetate, total volume 200nL |






