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7FUI

Crystal Structure of human cyclic GMP-AMP synthase in complex with (Z)-2-cyano-N-[4-(3-fluorophenyl)-5-methylsulfonylpyrimidin-2-yl]-3-hydroxy-3-(5-methyl-1,2-oxazol-4-yl)prop-2-enamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-05-12
DetectorPSI PILATUS 6M
Wavelength(s)1.000030
Spacegroup nameP 21 2 21
Unit cell lengths50.741, 60.215, 128.577
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.990 - 1.740
R-factor0.2113
Rwork0.208
R-free0.27140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.009
RMSD bond angle1.490
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.95043.9901.790
High resolution limit [Å]1.7407.7801.740
Rmerge0.0450.0253.053
Rmeas0.0490.0283.315
Total number of observations266967
Number of reflections413255523025
<I/σ(I)>15.1348.10.57
Completeness [%]99.998.9100
Redundancy6.465.4936.617
CC(1/2)0.9990.9990.275
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729310-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals.

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PDB entries from 2024-05-15

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