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7FTX

Crystal Structure of apo human cyclic GMP-AMP synthase - hexagonal form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-13
DetectorPSI PILATUS 6M
Wavelength(s)1.00000
Spacegroup nameP 61 2 2
Unit cell lengths101.235, 101.235, 240.332
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution82.360 - 2.831
R-factor0.2446
Rwork0.243
R-free0.27800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.007
RMSD bond angle0.870
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.8 (21-NOV-2022))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]82.36082.3603.120
High resolution limit [Å]3.04013.6003.040
Rmerge0.3900.0393.756
Rmeas0.4010.0413.857
Total number of observations279829
Number of reflections148252321057
<I/σ(I)>10.7146.71.09
Completeness [%]99.998.7100
Redundancy18.87514.68519.264
CC(1/2)0.9961.0000.412
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729310-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals.

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PDB entries from 2024-05-15

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