7FTV
Crystal Structure of human cyclic GMP-AMP synthase in complex with 5-bromo-2-hydroxy-N-(quinolin-6-ylmethyl)benzamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-06 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.999900 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 45.336, 59.616, 162.512 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 59.616 - 1.875 |
R-factor | 0.2144 |
Rwork | 0.212 |
R-free | 0.25330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | inhouse model |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.620 | 59.616 | 1.920 |
High resolution limit [Å] | 1.880 | 8.390 | 1.880 |
Rmerge | 0.044 | 0.020 | 3.641 |
Rmeas | 0.048 | 0.022 | 3.947 |
Total number of observations | 238294 | ||
Number of reflections | 37042 | 500 | 2699 |
<I/σ(I)> | 17.26 | 58.53 | 0.51 |
Completeness [%] | 99.8 | 98.6 | 100 |
Redundancy | 6.433 | 5.744 | 6.663 |
CC(1/2) | 0.999 | 0.999 | 0.178 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | 10-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals |