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7FTJ

Crystal Structure of apo human cyclic GMP-AMP synthase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2018-02-05
DetectorPSI PILATUS 6M
Wavelength(s)0.999940
Spacegroup nameP 21 2 21
Unit cell lengths47.886, 57.293, 122.106
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution57.293 - 1.461
R-factor0.1915
Rwork0.191
R-free0.21010
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.009
RMSD bond angle0.810
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.12rc1_2801)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]57.29057.2931.500
High resolution limit [Å]1.4606.5301.460
Rmerge0.0500.0262.064
Rmeas0.0540.0282.226
Total number of observations419901
Number of reflections590977784283
<I/σ(I)>16.5454.840.93
Completeness [%]99.999.599.9
Redundancy7.1056.4227.003
CC(1/2)0.9990.9990.358
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729310-12 mg/mL protein in 25 mM Tris/HCl pH7.5, 500mM NaCl, 2mM TCEP, supplemented with 10x molar excess of ligand and, if needed, with 10 mM MgCl2 and 5mM ATP, then mixed 1:1 with reservoir of the Procomplex screen. Several conditions resulted in crystals.

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PDB entries from 2024-05-15

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